Base Plot Configuration Pool#
This page documents Utopia’s base plot configuration pool which is used for aggregating a plot configuration using multiple inheritance.
Note
Important: All entries here are in addition to the dantro base plots configuration pool and the utopya base plots configuration pool.
More precisely, the Utopia base plots config pool requires the above pools, as it inherits some entries using the based_on key in a plot configuration.
The lookup order is as follows:
Utopia base plots (this file)
If in a separate model projects: Project-specific base plots
Model-specific base plots
Note that you can also adjust base plot configurations.
The entries below are sorted by segments and are using dantro’s naming convention. Some sections are still empty, meaning that Utopia does not define new entries there.
Hint
To quickly search for individual entries, the search functionality of your browser (Cmd + F) may be very helpful.
Note that some entries (like those of the YAML anchors) may only be found if the complete file reference is expanded.
.defaults: default entries#
# This section defines defaults that are (meant to be) used in all plots.
# These find their way into the plot configuration via the `.creator` configs.
# .. Aggregated defaults ......................................................
.defaults:
based_on:
- .defaults # utopya .defaults
- .defaults.style
- .defaults.file_ext
# .. Individual defaults ......................................................
.defaults.style:
based_on: .defaults.style
.defaults.file_ext:
file_ext: pdf
.creator: selecting a plot creator#
More information: Plot Creators
# This is where the above defaults enter the plot configuration
.creator.base:
based_on:
- .creator.base
- .defaults
.creator.pyplot:
based_on:
- .creator.pyplot
- .defaults
.creator.universe:
based_on:
- .creator.universe
- .defaults
universes: all
.creator.multiverse:
based_on:
- .creator.multiverse
- .defaults
# .. Specializations ..........................................................
.creator.universe.any:
based_on: .creator.universe
universes: any
.creator.universe.first:
based_on: .creator.universe
universes: first
.creator.universe.all:
based_on: .creator.universe
universes: all
.plot: selecting a plot function#
More information:
# -- Overloads of existing plot functions -------------------------------------
.plot.facet_grid.scatter:
based_on: .plot.facet_grid
kind: scatter
.plot.ca:
based_on:
- .plot.ca
- .animation.defaults
imshow_hexagonal_extra_kwargs:
# Need a custom mapping for grid properties because space size is written
# to the `space_extent` attribute, not `space_size`
grid_properties_keys:
space_size: space_extent
.skip: skip conditions#
These can be used to skip multiverse plots if a sweep did not have a certain dimensionality.
This can be useful to restrict the scope of automatically created facet grid plots.
.skip.if_less_than_1D:
expected_multiverse_ndim: [1, 2, 3, 4, 5]
.skip.if_less_than_2D:
expected_multiverse_ndim: [2, 3, 4, 5]
.skip.if_more_than_1D:
expected_multiverse_ndim: [0, 1]
.skip.if_more_than_2D:
expected_multiverse_ndim: [0, 1, 2]
.skip.if_more_than_3D:
expected_multiverse_ndim: [0, 1, 2, 3]
.skip.if_more_than_4D:
expected_multiverse_ndim: [0, 1, 2, 3, 4]
.skip.if_more_than_5D:
expected_multiverse_ndim: [0, 1, 2, 3, 4, 5]
.style: choosing plot style#
More information:
.hlpr: invoking individual plot helper functions#
More information: Using the PlotHelper
# For specific kinds of representations .......................................
# A time series plot along the x-axis
.hlpr.kind.time_series:
based_on:
- .hlpr.ticks.x.si_suffixes
helpers:
set_limits:
x: [min, max]
axis_specific:
[~, -1]: # bottom row
set_labels:
x: *label_time
.animation: controlling animation#
More information:
# The default animation config
.animation.defaults:
based_on:
- .animation.defaults # from utopya
- .animation.medium_dpi # from here
# By default, use the ffmpeg writer and the mp4 output format
file_ext: mp4
animation:
writer: ffmpeg
# Animation defaults that are disabled by default
.animation.disabled:
based_on:
- .animation.defaults
- .animation.disabled
- .defaults.file_ext
# Base configs enabling animation for a writer & including the Utopia defaults
.animation.ffmpeg:
based_on:
- .animation.ffmpeg # from utopya
- .animation.defaults # from here
.animation.frames:
based_on:
- .animation.frames # from utopya
- .animation.defaults # from here
- .defaults.file_ext # from here
animation:
writer: frames
# DPI settings
.animation.medium_dpi:
animation:
writer_kwargs:
frames:
saving:
dpi: 96
ffmpeg:
saving:
dpi: 96
.animation.very_high_dpi:
animation:
writer_kwargs:
frames:
saving:
dpi: 254
ffmpeg:
saving:
dpi: 254
# FPS settings
.animation.fps10:
based_on: .animation.ffmpeg
animation:
writer_kwargs:
ffmpeg:
init:
fps: 10
.animation.fps20:
based_on: .animation.ffmpeg
animation:
writer_kwargs:
ffmpeg:
init:
fps: 20
.animation.fps24:
based_on: .animation.ffmpeg
animation:
writer_kwargs:
ffmpeg:
init:
fps: 24
.animation.fps30:
based_on: .animation.ffmpeg
animation:
writer_kwargs:
ffmpeg:
init:
fps: 30
.dag: configuring the DAG framework#
More information:
# -- Options ------------------------------------------------------------------
# .. Aggregated DAG default options ...........................................
.dag.defaults:
based_on: .dag.defaults
# -- Visualization ------------------------------------------------------------
# Parameters controlling DAG visualization
.dag.vis.defaults:
based_on: .dag.vis.defaults
# -- Definitions --------------------------------------------------------------
# The entries below set certain tags using the `dag_options.define` argument.
# This should not be confused with the .dag.meta_ops defined below.
.dag.define.defaults:
based_on: .dag.define.defaults
.dag.meta_ops: meta operations#
The following entries can be included into a plot configuration to make pre-defined meta-operations available for the data transformation framework.
# The following entries can be included into a plot configuration to make
# certain meta-operations available for the data transformation framework.
Complete File Reference#
# Base plot configuration for models using the Utopia framework
#
# This file contains shared config entries that can be used in the composition
# of plot configurations.
#
# TODO Should these all move to utopya's base plots??
---
# YAML anchors used throughout this file
_:
labels:
time: &label_time Time [Steps]
aesthetics:
hvline: &style_hvline
linestyle: solid
color: grey
alpha: .4
linewidth: 2.
zorder: -42
# =============================================================================
# ╔╦╗╔═╗╔═╗╔═╗╦ ╦╦ ╔╦╗╔═╗
# ║║║╣ ╠╣ ╠═╣║ ║║ ║ ╚═╗
# ═╩╝╚═╝╚ ╩ ╩╚═╝╩═╝╩ ╚═╝
# =============================================================================
# start: .defaults
# This section defines defaults that are (meant to be) used in all plots.
# These find their way into the plot configuration via the `.creator` configs.
# .. Aggregated defaults ......................................................
.defaults:
based_on:
- .defaults # utopya .defaults
- .defaults.style
- .defaults.file_ext
# .. Individual defaults ......................................................
.defaults.style:
based_on: .defaults.style
.defaults.file_ext:
file_ext: pdf
# =============================================================================
# ╔═╗╦ ╔═╗╔╦╗ ╔═╗╦═╗╔═╗╔═╗╔╦╗╔═╗╦═╗╔═╗
# ╠═╝║ ║ ║ ║ ║ ╠╦╝║╣ ╠═╣ ║ ║ ║╠╦╝╚═╗
# ╩ ╩═╝╚═╝ ╩ ╚═╝╩╚═╚═╝╩ ╩ ╩ ╚═╝╩╚═╚═╝
# =============================================================================
# start: .creator
# This is where the above defaults enter the plot configuration
.creator.base:
based_on:
- .creator.base
- .defaults
.creator.pyplot:
based_on:
- .creator.pyplot
- .defaults
.creator.universe:
based_on:
- .creator.universe
- .defaults
universes: all
.creator.multiverse:
based_on:
- .creator.multiverse
- .defaults
# .. Specializations ..........................................................
.creator.universe.any:
based_on: .creator.universe
universes: any
.creator.universe.first:
based_on: .creator.universe
universes: first
.creator.universe.all:
based_on: .creator.universe
universes: all
# =============================================================================
# ╔═╗╦ ╔═╗╔╦╗ ╔═╗╦ ╦╔╗╔╔═╗╔╦╗╦╔═╗╔╗╔╔═╗
# ╠═╝║ ║ ║ ║ ╠╣ ║ ║║║║║ ║ ║║ ║║║║╚═╗
# ╩ ╩═╝╚═╝ ╩ ╚ ╚═╝╝╚╝╚═╝ ╩ ╩╚═╝╝╚╝╚═╝
# =============================================================================
# start: .plot
# -- Overloads of existing plot functions -------------------------------------
.plot.facet_grid.scatter:
based_on: .plot.facet_grid
kind: scatter
.plot.ca:
based_on:
- .plot.ca
- .animation.defaults
imshow_hexagonal_extra_kwargs:
# Need a custom mapping for grid properties because space size is written
# to the `space_extent` attribute, not `space_size`
grid_properties_keys:
space_size: space_extent
# =============================================================================
# ╔═╗╦╔═╦╔═╗ ╔═╗╔═╗╔╗╔╔╦╗╦╔╦╗╦╔═╗╔╗╔╔═╗
# ╚═╗╠╩╗║╠═╝ ║ ║ ║║║║ ║║║ ║ ║║ ║║║║╚═╗
# ╚═╝╩ ╩╩╩ ╚═╝╚═╝╝╚╝═╩╝╩ ╩ ╩╚═╝╝╚╝╚═╝
# =============================================================================
# start: .skip
.skip.if_less_than_1D:
expected_multiverse_ndim: [1, 2, 3, 4, 5]
.skip.if_less_than_2D:
expected_multiverse_ndim: [2, 3, 4, 5]
.skip.if_more_than_1D:
expected_multiverse_ndim: [0, 1]
.skip.if_more_than_2D:
expected_multiverse_ndim: [0, 1, 2]
.skip.if_more_than_3D:
expected_multiverse_ndim: [0, 1, 2, 3]
.skip.if_more_than_4D:
expected_multiverse_ndim: [0, 1, 2, 3, 4]
.skip.if_more_than_5D:
expected_multiverse_ndim: [0, 1, 2, 3, 4, 5]
# =============================================================================
# ╔═╗╔╦╗╦ ╦╦ ╔═╗
# ╚═╗ ║ ╚╦╝║ ║╣
# ╚═╝ ╩ ╩ ╩═╝╚═╝
# =============================================================================
# start: .style
# =============================================================================
# ╔═╗╦ ╔═╗╔╦╗ ╦ ╦╔═╗╦ ╔═╗╔═╗╦═╗╔═╗
# ╠═╝║ ║ ║ ║ ╠═╣║╣ ║ ╠═╝║╣ ╠╦╝╚═╗
# ╩ ╩═╝╚═╝ ╩ ╩ ╩╚═╝╩═╝╩ ╚═╝╩╚═╚═╝
# =============================================================================
# start: .hlpr
# For specific kinds of representations .......................................
# A time series plot along the x-axis
.hlpr.kind.time_series:
based_on:
- .hlpr.ticks.x.si_suffixes
helpers:
set_limits:
x: [min, max]
axis_specific:
[~, -1]: # bottom row
set_labels:
x: *label_time
# =============================================================================
# ╔═╗╔╗╔╦╔╦╗╔═╗╔╦╗╦╔═╗╔╗╔
# ╠═╣║║║║║║║╠═╣ ║ ║║ ║║║║
# ╩ ╩╝╚╝╩╩ ╩╩ ╩ ╩ ╩╚═╝╝╚╝
# =============================================================================
# start: .animation
# The default animation config
.animation.defaults:
based_on:
- .animation.defaults # from utopya
- .animation.medium_dpi # from here
# By default, use the ffmpeg writer and the mp4 output format
file_ext: mp4
animation:
writer: ffmpeg
# Animation defaults that are disabled by default
.animation.disabled:
based_on:
- .animation.defaults
- .animation.disabled
- .defaults.file_ext
# Base configs enabling animation for a writer & including the Utopia defaults
.animation.ffmpeg:
based_on:
- .animation.ffmpeg # from utopya
- .animation.defaults # from here
.animation.frames:
based_on:
- .animation.frames # from utopya
- .animation.defaults # from here
- .defaults.file_ext # from here
animation:
writer: frames
# DPI settings
.animation.medium_dpi:
animation:
writer_kwargs:
frames:
saving:
dpi: 96
ffmpeg:
saving:
dpi: 96
.animation.very_high_dpi:
animation:
writer_kwargs:
frames:
saving:
dpi: 254
ffmpeg:
saving:
dpi: 254
# FPS settings
.animation.fps10:
based_on: .animation.ffmpeg
animation:
writer_kwargs:
ffmpeg:
init:
fps: 10
.animation.fps20:
based_on: .animation.ffmpeg
animation:
writer_kwargs:
ffmpeg:
init:
fps: 20
.animation.fps24:
based_on: .animation.ffmpeg
animation:
writer_kwargs:
ffmpeg:
init:
fps: 24
.animation.fps30:
based_on: .animation.ffmpeg
animation:
writer_kwargs:
ffmpeg:
init:
fps: 30
# =============================================================================
# ╔╦╗╔═╗╔═╗ ╔═╗╦═╗╔═╗╔╦╗╔═╗╦ ╦╔═╗╦═╗╦╔═
# ║║╠═╣║ ╦ ╠╣ ╠╦╝╠═╣║║║║╣ ║║║║ ║╠╦╝╠╩╗
# ═╩╝╩ ╩╚═╝ ╚ ╩╚═╩ ╩╩ ╩╚═╝╚╩╝╚═╝╩╚═╩ ╩
# =============================================================================
# start: .dag
# -- Options ------------------------------------------------------------------
# .. Aggregated DAG default options ...........................................
.dag.defaults:
based_on: .dag.defaults
# -- Visualization ------------------------------------------------------------
# Parameters controlling DAG visualization
.dag.vis.defaults:
based_on: .dag.vis.defaults
# -- Definitions --------------------------------------------------------------
# The entries below set certain tags using the `dag_options.define` argument.
# This should not be confused with the .dag.meta_ops defined below.
.dag.define.defaults:
based_on: .dag.define.defaults
# =============================================================================
# ╔╦╗╔═╗╔═╗ ╔╦╗╔═╗╔╦╗╔═╗ ╔═╗╔═╗╔═╗╦═╗╔═╗╔╦╗╦╔═╗╔╗╔╔═╗
# ║║╠═╣║ ╦ ║║║║╣ ║ ╠═╣ ║ ║╠═╝║╣ ╠╦╝╠═╣ ║ ║║ ║║║║╚═╗
# ═╩╝╩ ╩╚═╝ ╩ ╩╚═╝ ╩ ╩ ╩ ╚═╝╩ ╚═╝╩╚═╩ ╩ ╩ ╩╚═╝╝╚╝╚═╝
# =============================================================================
# start: .dag.meta_ops
# The following entries can be included into a plot configuration to make
# certain meta-operations available for the data transformation framework.
# =============================================================================